Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Gm24752-201ENSMUST00000178240 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm24496-201ENSMUST00000178287 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm25649-201ENSMUST00000178476 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm25548-201ENSMUST00000178681 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm23147-201ENSMUST00000178841 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm26095-201ENSMUST00000179270 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm22171-201ENSMUST00000179283 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm23936-201ENSMUST00000179354 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm22619-201ENSMUST00000179516 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm25255-201ENSMUST00000179579 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm24755-201ENSMUST00000179691 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm26506-201ENSMUST00000179692 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm25086-201ENSMUST00000179931 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm23243-201ENSMUST00000180047 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm24659-201ENSMUST00000180212 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm24169-201ENSMUST00000180244 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm23689-201ENSMUST00000180354 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.04■□□□□ -0
Nr1i3O35627 Gm27359-201ENSMUST00000184153 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm27785-201ENSMUST00000184268 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm27466-201ENSMUST00000184396 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Gm27703-201ENSMUST00000184836 110 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.04■□□□□ -0
Nr1i3O35627 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nr1i3O35627 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Nr1i3O35627 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.04■□□□□ -0
Nr1i3O35627 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nr1i3O35627 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1i3O35627 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.03■□□□□ -0
Nr1i3O35627 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Nr1i3O35627 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.03■□□□□ -0
Nr1i3O35627 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Gm4995-201ENSMUST00000117247 432 ntBASIC15.03■□□□□ -0
Nr1i3O35627 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Nr1i3O35627 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.03■□□□□ -0
Nr1i3O35627 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.03■□□□□ -0
Nr1i3O35627 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Gm16476-201ENSMUST00000221544 139 ntBASIC15.03■□□□□ -0
Nr1i3O35627 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.03■□□□□ -0
Nr1i3O35627 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1i3O35627 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Nr1i3O35627 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Nr1i3O35627 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nr1i3O35627 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nr1i3O35627 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Nr1i3O35627 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Dupd1-202ENSMUST00000224735 548 ntBASIC15.02■□□□□ -0
Nr1i3O35627 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1i3O35627 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nr1i3O35627 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1i3O35627 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.02□□□□□ -0.01
Nr1i3O35627 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1i3O35627 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1i3O35627 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Nr1i3O35627 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1i3O35627 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1i3O35627 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1i3O35627 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nr1i3O35627 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.02□□□□□ -0.01
Nr1i3O35627 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nr1i3O35627 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1i3O35627 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1i3O35627 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1i3O35627 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1i3O35627 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nr1i3O35627 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms