Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Atf6bO35451 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Atf6bO35451 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.19□□□□□ -0.46
Atf6bO35451 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.19□□□□□ -0.46
Atf6bO35451 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.19□□□□□ -0.46
Atf6bO35451 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.19□□□□□ -0.46
Atf6bO35451 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Gm10275-202ENSMUST00000168697 495 ntBASIC12.19□□□□□ -0.46
Atf6bO35451 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.19□□□□□ -0.46
Atf6bO35451 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.19□□□□□ -0.46
Atf6bO35451 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.19□□□□□ -0.46
Atf6bO35451 Gm10275-201ENSMUST00000092620 635 ntBASIC12.19□□□□□ -0.46
Atf6bO35451 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.19□□□□□ -0.46
Atf6bO35451 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.19□□□□□ -0.46
Atf6bO35451 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Atf6bO35451 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Atf6bO35451 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.19□□□□□ -0.46
Atf6bO35451 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.19□□□□□ -0.46
Atf6bO35451 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Atf6bO35451 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Atf6bO35451 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.18□□□□□ -0.46
Atf6bO35451 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.18□□□□□ -0.46
Atf6bO35451 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Gm5566-201ENSMUST00000116118 459 ntBASIC12.18□□□□□ -0.46
Atf6bO35451 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.18□□□□□ -0.46
Atf6bO35451 Gm25144-201ENSMUST00000179561 110 ntBASIC12.18□□□□□ -0.46
Atf6bO35451 Gm25352-201ENSMUST00000179815 110 ntBASIC12.18□□□□□ -0.46
Atf6bO35451 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Atf6bO35451 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.18□□□□□ -0.46
Atf6bO35451 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Atf6bO35451 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Atf6bO35451 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atf6bO35451 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.18□□□□□ -0.46
Atf6bO35451 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.17□□□□□ -0.46
Atf6bO35451 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.17□□□□□ -0.46
Atf6bO35451 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Atf6bO35451 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atf6bO35451 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Atf6bO35451 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Atf6bO35451 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Atf6bO35451 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Atf6bO35451 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Gm27618-201ENSMUST00000183671 60 ntBASIC12.17□□□□□ -0.46
Atf6bO35451 Gm27622-201ENSMUST00000183779 60 ntBASIC12.17□□□□□ -0.46
Atf6bO35451 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.17□□□□□ -0.46
Atf6bO35451 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.17□□□□□ -0.46
Atf6bO35451 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.17□□□□□ -0.46
Atf6bO35451 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms