Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Polr1aO35134 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Polr1aO35134 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC21.14■□□□□ 0.98
Polr1aO35134 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Polr1aO35134 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Polr1aO35134 Gm5637-201ENSMUST00000153890 1119 ntBASIC21.14■□□□□ 0.97
Polr1aO35134 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Polr1aO35134 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC21.14■□□□□ 0.97
Polr1aO35134 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Polr1aO35134 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Polr1aO35134 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Polr1aO35134 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC21.14■□□□□ 0.97
Polr1aO35134 Gm3756-201ENSMUST00000169182 1355 ntBASIC21.14■□□□□ 0.97
Polr1aO35134 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Polr1aO35134 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Polr1aO35134 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Polr1aO35134 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Polr1aO35134 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr1aO35134 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Polr1aO35134 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Polr1aO35134 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC21.13■□□□□ 0.97
Polr1aO35134 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Polr1aO35134 Gm6621-201ENSMUST00000193251 772 ntBASIC21.13■□□□□ 0.97
Polr1aO35134 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Polr1aO35134 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.13■□□□□ 0.97
Polr1aO35134 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC21.13■□□□□ 0.97
Polr1aO35134 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC21.13■□□□□ 0.97
Polr1aO35134 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr1aO35134 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr1aO35134 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Polr1aO35134 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Polr1aO35134 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Polr1aO35134 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC21.12■□□□□ 0.97
Polr1aO35134 AC022775.2-201ENSMUST00000227885 646 ntBASIC21.12■□□□□ 0.97
Polr1aO35134 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.12■□□□□ 0.97
Polr1aO35134 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Polr1aO35134 Gm2231-201ENSMUST00000125661 612 ntBASIC21.12■□□□□ 0.97
Polr1aO35134 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Gm5896-201ENSMUST00000189662 1024 ntBASIC21.12■□□□□ 0.97
Polr1aO35134 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC21.12■□□□□ 0.97
Polr1aO35134 Gm7619-201ENSMUST00000210649 1282 ntBASIC21.12■□□□□ 0.97
Polr1aO35134 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Polr1aO35134 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
Polr1aO35134 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Polr1aO35134 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Polr1aO35134 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Gm15889-202ENSMUST00000212669 2443 ntBASIC21.11■□□□□ 0.97
Polr1aO35134 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Polr1aO35134 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Gm12363-201ENSMUST00000122250 668 ntBASIC21.11■□□□□ 0.97
Polr1aO35134 Gm11978-201ENSMUST00000122315 466 ntBASIC21.11■□□□□ 0.97
Polr1aO35134 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Mir3547-201ENSMUST00000175461 88 ntBASIC21.11■□□□□ 0.97
Polr1aO35134 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Gm18056-201ENSMUST00000207670 568 ntBASIC21.11■□□□□ 0.97
Polr1aO35134 Gm18061-201ENSMUST00000208350 562 ntBASIC21.11■□□□□ 0.97
Polr1aO35134 Gm18063-201ENSMUST00000208529 568 ntBASIC21.11■□□□□ 0.97
Polr1aO35134 Gm18052-201ENSMUST00000208750 559 ntBASIC21.11■□□□□ 0.97
Polr1aO35134 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 AC132384.14-201ENSMUST00000219346 1147 ntBASIC21.11■□□□□ 0.97
Polr1aO35134 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC21.11■□□□□ 0.97
Polr1aO35134 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Polr1aO35134 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC21.11■□□□□ 0.97
Polr1aO35134 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC21.11■□□□□ 0.97
Polr1aO35134 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Polr1aO35134 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Polr1aO35134 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Polr1aO35134 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Polr1aO35134 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Polr1aO35134 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms