Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ebf3O08791 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.56□□□□□ -0.08
Ebf3O08791 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ebf3O08791 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ebf3O08791 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.55□□□□□ -0.08
Ebf3O08791 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ebf3O08791 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ebf3O08791 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ebf3O08791 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Ebf3O08791 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.55□□□□□ -0.08
Ebf3O08791 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Gm19220-201ENSMUST00000222682 803 ntBASIC14.55□□□□□ -0.08
Ebf3O08791 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ebf3O08791 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ebf3O08791 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ebf3O08791 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ebf3O08791 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Ebf3O08791 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ebf3O08791 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ebf3O08791 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.54□□□□□ -0.08
Ebf3O08791 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.54□□□□□ -0.08
Ebf3O08791 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ebf3O08791 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ebf3O08791 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.54□□□□□ -0.08
Ebf3O08791 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.54□□□□□ -0.08
Ebf3O08791 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.54□□□□□ -0.08
Ebf3O08791 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.54□□□□□ -0.08
Ebf3O08791 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ebf3O08791 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Ebf3O08791 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.54□□□□□ -0.08
Ebf3O08791 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ebf3O08791 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Ebf3O08791 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Matn2-206ENSMUST00000228570 2798 ntBASIC14.53□□□□□ -0.08
Ebf3O08791 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.53□□□□□ -0.08
Ebf3O08791 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.53□□□□□ -0.08
Ebf3O08791 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.53□□□□□ -0.08
Ebf3O08791 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.53□□□□□ -0.08
Ebf3O08791 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Ebf3O08791 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ebf3O08791 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms