Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.78■□□□□ 0.28
NpcdF8VQB8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NpcdF8VQB8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Mir7070-201ENSMUST00000183657 86 ntBASIC16.77■□□□□ 0.28
NpcdF8VQB8 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NpcdF8VQB8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NpcdF8VQB8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NpcdF8VQB8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NpcdF8VQB8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
NpcdF8VQB8 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.76■□□□□ 0.27
NpcdF8VQB8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Gm18473-201ENSMUST00000220543 868 ntBASIC16.76■□□□□ 0.27
NpcdF8VQB8 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.76■□□□□ 0.27
NpcdF8VQB8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.76■□□□□ 0.27
NpcdF8VQB8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NpcdF8VQB8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.75■□□□□ 0.27
NpcdF8VQB8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Gm11803-201ENSMUST00000119966 444 ntBASIC16.75■□□□□ 0.27
NpcdF8VQB8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NpcdF8VQB8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.75■□□□□ 0.27
NpcdF8VQB8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.75■□□□□ 0.27
NpcdF8VQB8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms