Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh9F8VPK8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdh9F8VPK8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Acot6-202ENSMUST00000222921 3622 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Gm13015-201ENSMUST00000118674 204 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Gm18889-201ENSMUST00000174284 929 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Gm27702-201ENSMUST00000184512 56 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Gm45453-201ENSMUST00000211758 853 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdh9F8VPK8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh9F8VPK8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh9F8VPK8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdh9F8VPK8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdh9F8VPK8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms