Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb9E9Q5G2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb9E9Q5G2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Gm14928-201ENSMUST00000120198 477 ntBASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Gm37917-201ENSMUST00000194711 392 ntBASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Gm45668-201ENSMUST00000211271 493 ntBASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Gm18624-201ENSMUST00000220966 658 ntBASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb9E9Q5G2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Gm43094-201ENSMUST00000196549 921 ntBASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Gm19220-201ENSMUST00000222682 803 ntBASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.41■□□□□ 0.22
Pcdhb9E9Q5G2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms