Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ccdc71lE9Q4T4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Ccdc71lE9Q4T4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc71lE9Q4T4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc71lE9Q4T4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc71lE9Q4T4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc71lE9Q4T4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc71lE9Q4T4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc71lE9Q4T4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc71lE9Q4T4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ccdc71lE9Q4T4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Gm4899-201ENSMUST00000178708 719 ntBASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Gm28033-201ENSMUST00000184224 96 ntBASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc71lE9Q4T4 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm7862-201ENSMUST00000121461 292 ntBASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm8584-201ENSMUST00000171982 758 ntBASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Mir8098-201ENSMUST00000184011 137 ntBASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Ank2-226ENSMUST00000189368 339 ntBASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm45098-201ENSMUST00000207179 657 ntBASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm10060-201ENSMUST00000212002 111 ntBASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc71lE9Q4T4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms