Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.78□□□□□ -0.2
Srp54bE9PXC0 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Srp54bE9PXC0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Srp54bE9PXC0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Srp54bE9PXC0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Srp54bE9PXC0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Gm15678-201ENSMUST00000117573 960 ntBASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.77□□□□□ -0.21
Srp54bE9PXC0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Gm25857-201ENSMUST00000082788 129 ntBASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Srp54bE9PXC0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.76□□□□□ -0.21
Srp54bE9PXC0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Srp54bE9PXC0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms