Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a3E9PWQ3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Gm28324-201ENSMUST00000187913 264 ntBASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a3E9PWQ3 Gm11980-201ENSMUST00000121445 986 ntBASIC13.65□□□□□ -0.23
Col6a3E9PWQ3 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Col6a3E9PWQ3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.65□□□□□ -0.23
Col6a3E9PWQ3 Gm9111-201ENSMUST00000219394 709 ntBASIC13.65□□□□□ -0.23
Col6a3E9PWQ3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Gm24420-201ENSMUST00000176676 59 ntBASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Gm14109-201ENSMUST00000118814 309 ntBASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Gm5950-201ENSMUST00000213337 772 ntBASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Gm10076-201ENSMUST00000073238 384 ntBASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a3E9PWQ3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm45550-201ENSMUST00000209380 946 ntBASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a3E9PWQ3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms