Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmcn1D3YXG0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmcn1D3YXG0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmcn1D3YXG0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hmcn1D3YXG0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Hmcn1D3YXG0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmcn1D3YXG0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC3.95□□□□□ -1.78
Hmcn1D3YXG0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Tgm5-201ENSMUST00000028721 2613 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm13859-201ENSMUST00000119936 1423 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm23949-201ENSMUST00000104027 127 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm14350-201ENSMUST00000116642 640 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm11980-201ENSMUST00000121445 986 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm18734-201ENSMUST00000172937 808 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm3096-201ENSMUST00000185770 364 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm44069-201ENSMUST00000204898 506 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm19439-201ENSMUST00000198195 2273 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm15547-201ENSMUST00000122152 333 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm10313-201ENSMUST00000095320 1002 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm21009-201ENSMUST00000197169 1669 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm15881-201ENSMUST00000148792 942 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Gm7985-201ENSMUST00000183329 981 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 AC134537.1-201ENSMUST00000219205 265 ntBASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hmcn1D3YXG0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms