Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC18.91■□□□□ 0.62
Tmf1B9EKI3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tmf1B9EKI3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Gm5354-201ENSMUST00000182417 973 ntBASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tmf1B9EKI3 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.89■□□□□ 0.62
Tmf1B9EKI3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tmf1B9EKI3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tmf1B9EKI3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Gm19220-201ENSMUST00000222682 803 ntBASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tmf1B9EKI3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tmf1B9EKI3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms