Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Gm25144-201ENSMUST00000179561 110 ntBASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Gm25352-201ENSMUST00000179815 110 ntBASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd2l1A2A259 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Gm28630-201ENSMUST00000187806 498 ntBASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Gm18766-201ENSMUST00000189811 808 ntBASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd2l1A2A259 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Mir7684-201ENSMUST00000183858 60 ntBASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd2l1A2A259 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pkd2l1A2A259 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Pkd2l1A2A259 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.71□□□□□ -0.21
Pkd2l1A2A259 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pkd2l1A2A259 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd2l1A2A259 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd2l1A2A259 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd2l1A2A259 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd2l1A2A259 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd2l1A2A259 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms