Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rprl2-201ENSMUST00000157150 290 ntBASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gm2445-201ENSMUST00000182798 989 ntBASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Ccdc112A0AUP1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Gm13823-201ENSMUST00000119930 345 ntBASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc112A0AUP1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Gm6222-201ENSMUST00000120787 396 ntBASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccdc112A0AUP1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc112A0AUP1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms