Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Speer3W4VSP1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Gm13333-201ENSMUST00000119424 781 ntBASIC14.35□□□□□ -0.11
Speer3W4VSP1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Gm36982-201ENSMUST00000193796 1128 ntBASIC14.35□□□□□ -0.11
Speer3W4VSP1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Speer3W4VSP1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Gm38188-201ENSMUST00000192879 856 ntBASIC14.34□□□□□ -0.11
Speer3W4VSP1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Speer3W4VSP1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Speer3W4VSP1 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Speer3W4VSP1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Speer3W4VSP1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Speer3W4VSP1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Speer3W4VSP1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Speer3W4VSP1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Speer3W4VSP1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Speer3W4VSP1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.33□□□□□ -0.11
Speer3W4VSP1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.33□□□□□ -0.12
Speer3W4VSP1 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.33□□□□□ -0.12
Speer3W4VSP1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Speer3W4VSP1 Gm13615-201ENSMUST00000120242 1612 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms