Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Gm2272-201ENSMUST00000194903 582 ntBASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Crlf3Q9Z2L7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Gm16026-204ENSMUST00000162652 683 ntBASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Gm45098-201ENSMUST00000207179 657 ntBASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Crlf3Q9Z2L7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Crlf3Q9Z2L7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms