Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm7153-201ENSMUST00000117092 455 ntBASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Grk6-205ENSMUST00000224653 2976 ntBASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cx3cr1Q9Z0D9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm16198-201ENSMUST00000118766 670 ntBASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm27300-201ENSMUST00000184085 97 ntBASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm27335-201ENSMUST00000184758 97 ntBASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.87□□□□□ -0.51
Cx3cr1Q9Z0D9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm7862-201ENSMUST00000121461 292 ntBASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm34391-201ENSMUST00000203706 907 ntBASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.86□□□□□ -0.51
Cx3cr1Q9Z0D9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms