Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.92□□□□□ -0.66
CcsQ9WU84 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CcsQ9WU84 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CcsQ9WU84 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
CcsQ9WU84 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
CcsQ9WU84 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CcsQ9WU84 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.92□□□□□ -0.66
CcsQ9WU84 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CcsQ9WU84 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.91□□□□□ -0.66
CcsQ9WU84 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Gm14722-201ENSMUST00000118943 689 ntBASIC10.91□□□□□ -0.66
CcsQ9WU84 Gm14140-201ENSMUST00000119999 995 ntBASIC10.91□□□□□ -0.66
CcsQ9WU84 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Gm27525-201ENSMUST00000184465 107 ntBASIC10.91□□□□□ -0.66
CcsQ9WU84 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.91□□□□□ -0.66
CcsQ9WU84 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CcsQ9WU84 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.91□□□□□ -0.66
CcsQ9WU84 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.91□□□□□ -0.66
CcsQ9WU84 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CcsQ9WU84 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
CcsQ9WU84 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.9□□□□□ -0.66
CcsQ9WU84 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CcsQ9WU84 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CcsQ9WU84 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CcsQ9WU84 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.9□□□□□ -0.66
CcsQ9WU84 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.9□□□□□ -0.66
CcsQ9WU84 Gm5682-201ENSMUST00000173402 505 ntBASIC10.9□□□□□ -0.66
CcsQ9WU84 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CcsQ9WU84 Gm27628-201ENSMUST00000184911 107 ntBASIC10.9□□□□□ -0.66
CcsQ9WU84 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.9□□□□□ -0.66
CcsQ9WU84 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.9□□□□□ -0.66
CcsQ9WU84 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms