Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
AmfrQ9R049 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
AmfrQ9R049 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.71■□□□□ 0.11
AmfrQ9R049 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
AmfrQ9R049 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.71■□□□□ 0.11
AmfrQ9R049 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
AmfrQ9R049 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.71■□□□□ 0.11
AmfrQ9R049 Gm27306-201ENSMUST00000183970 107 ntBASIC15.71■□□□□ 0.11
AmfrQ9R049 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.71■□□□□ 0.11
AmfrQ9R049 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.71■□□□□ 0.11
AmfrQ9R049 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AmfrQ9R049 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
AmfrQ9R049 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.7■□□□□ 0.1
AmfrQ9R049 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AmfrQ9R049 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AmfrQ9R049 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.7■□□□□ 0.1
AmfrQ9R049 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.7■□□□□ 0.1
AmfrQ9R049 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AmfrQ9R049 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AmfrQ9R049 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
AmfrQ9R049 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AmfrQ9R049 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
AmfrQ9R049 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
AmfrQ9R049 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm13223-201ENSMUST00000118609 747 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.69■□□□□ 0.1
AmfrQ9R049 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm25144-201ENSMUST00000179561 110 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm25352-201ENSMUST00000179815 110 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm29310-201ENSMUST00000185468 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21825-201ENSMUST00000185728 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm29109-201ENSMUST00000185895 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21896-201ENSMUST00000186520 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21873-201ENSMUST00000186728 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21794-201ENSMUST00000187056 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21880-201ENSMUST00000187275 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21826-201ENSMUST00000187451 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21198-201ENSMUST00000188393 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21749-201ENSMUST00000189343 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21901-201ENSMUST00000189568 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm29424-201ENSMUST00000189716 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm28599-201ENSMUST00000189838 694 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21867-201ENSMUST00000189917 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm29269-201ENSMUST00000190087 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21722-201ENSMUST00000190153 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm28423-201ENSMUST00000190701 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21899-201ENSMUST00000190745 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21910-201ENSMUST00000191163 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21849-201ENSMUST00000191571 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm28678-201ENSMUST00000191593 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm20910-201ENSMUST00000193268 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm21871-201ENSMUST00000194621 696 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.69■□□□□ 0.1
AmfrQ9R049 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
AmfrQ9R049 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AmfrQ9R049 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms