Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Pck2-205ENSMUST00000226352 2784 ntBASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmg20aQ9DC33 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmg20aQ9DC33 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Gm33142-201ENSMUST00000193913 867 ntBASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmg20aQ9DC33 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms