Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp4bQ9D8B3 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp4bQ9D8B3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp4bQ9D8B3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp4bQ9D8B3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp4bQ9D8B3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Gm23935-201ENSMUST00000102303 57 ntBASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Gm24270-201ENSMUST00000102326 57 ntBASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Gm24245-201ENSMUST00000157318 57 ntBASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Gm27622-201ENSMUST00000183779 60 ntBASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Gm43575-201ENSMUST00000196420 516 ntBASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp4bQ9D8B3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Chmp4bQ9D8B3 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Gm44719-201ENSMUST00000206404 149 ntBASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 CT030704.2-201ENSMUST00000228887 494 ntBASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp4bQ9D8B3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms