Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp5Q9D7S9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Gm6973-201ENSMUST00000117080 721 ntBASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp5Q9D7S9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp5Q9D7S9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.52■□□□□ 0.39
Chmp5Q9D7S9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp5Q9D7S9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp5Q9D7S9 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.52■□□□□ 0.39
Chmp5Q9D7S9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp5Q9D7S9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp5Q9D7S9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp5Q9D7S9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp5Q9D7S9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Gm44492-201ENSMUST00000197012 141 ntBASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp5Q9D7S9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.49■□□□□ 0.39
Chmp5Q9D7S9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms