Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chmp4cQ9D7F7 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Gm8584-201ENSMUST00000171982 758 ntBASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chmp4cQ9D7F7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chmp4cQ9D7F7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Gm10275-202ENSMUST00000168697 495 ntBASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Gm10275-201ENSMUST00000092620 635 ntBASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chmp4cQ9D7F7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Gm18057-201ENSMUST00000208220 503 ntBASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4cQ9D7F7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms