Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Gm6244-201ENSMUST00000178732 841 ntBASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Stag1Q9D3E6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Stag1Q9D3E6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Mir497b-201ENSMUST00000093601 125 ntBASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Stag1Q9D3E6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms