Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.83□□□□□ -0.2
Nipsnap3bQ9CQE1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm18206-201ENSMUST00000207027 926 ntBASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.82□□□□□ -0.2
Nipsnap3bQ9CQE1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nipsnap3bQ9CQE1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.8□□□□□ -0.2
Nipsnap3bQ9CQE1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 148.6 ms