Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Chchd1Q9CQA6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Gm2274-201ENSMUST00000184539 609 ntBASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Gm37722-201ENSMUST00000193757 208 ntBASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Gm42569-201ENSMUST00000200539 472 ntBASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Chchd1Q9CQA6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chchd1Q9CQA6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chchd1Q9CQA6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chchd1Q9CQA6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Chchd1Q9CQA6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Chchd1Q9CQA6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.52□□□□□ -0.73
Chchd1Q9CQA6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Chchd1Q9CQA6 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms