Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.96□□□□□ -0.17
Trim33Q99PP7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim33Q99PP7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim33Q99PP7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim33Q99PP7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim33Q99PP7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim33Q99PP7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim33Q99PP7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim33Q99PP7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim33Q99PP7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim33Q99PP7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim33Q99PP7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim33Q99PP7 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trim33Q99PP7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim33Q99PP7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trim33Q99PP7 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.96□□□□□ -0.18
Trim33Q99PP7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trim33Q99PP7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Gm5566-201ENSMUST00000116118 459 ntBASIC13.95□□□□□ -0.18
Trim33Q99PP7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Gm28630-201ENSMUST00000187806 498 ntBASIC13.95□□□□□ -0.18
Trim33Q99PP7 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.95□□□□□ -0.18
Trim33Q99PP7 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.95□□□□□ -0.18
Trim33Q99PP7 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.95□□□□□ -0.18
Trim33Q99PP7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Matn2-206ENSMUST00000228570 2798 ntBASIC13.95□□□□□ -0.18
Trim33Q99PP7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.95□□□□□ -0.18
Trim33Q99PP7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.95□□□□□ -0.18
Trim33Q99PP7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim33Q99PP7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Gm8410-201ENSMUST00000117225 605 ntBASIC13.94□□□□□ -0.18
Trim33Q99PP7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Gm27631-201ENSMUST00000184163 466 ntBASIC13.94□□□□□ -0.18
Trim33Q99PP7 Gm27430-201ENSMUST00000184585 107 ntBASIC13.94□□□□□ -0.18
Trim33Q99PP7 Gm19891-201ENSMUST00000189771 303 ntBASIC13.94□□□□□ -0.18
Trim33Q99PP7 Gm44333-201ENSMUST00000197168 107 ntBASIC13.94□□□□□ -0.18
Trim33Q99PP7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim33Q99PP7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.93□□□□□ -0.18
Trim33Q99PP7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim33Q99PP7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms