Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Gm15460-201ENSMUST00000118147 391 ntBASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Gm8810-201ENSMUST00000172895 754 ntBASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Gm37835-201ENSMUST00000193305 361 ntBASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col25a1Q99MQ5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col25a1Q99MQ5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Efs-202ENSMUST00000227037 2540 ntBASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm13612-201ENSMUST00000119276 390 ntBASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm8566-201ENSMUST00000120174 465 ntBASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm2991-201ENSMUST00000173338 480 ntBASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm20482-202ENSMUST00000174729 825 ntBASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm4804-201ENSMUST00000182234 999 ntBASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm29396-201ENSMUST00000185659 716 ntBASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm3508-201ENSMUST00000186012 792 ntBASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col25a1Q99MQ5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.46□□□□□ -0.1
Col25a1Q99MQ5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col25a1Q99MQ5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms