Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx6-1Q99MA9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Gm13612-201ENSMUST00000119276 390 ntBASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Gm26464-201ENSMUST00000157094 305 ntBASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Gm24196-201ENSMUST00000179161 110 ntBASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Gm27514-201ENSMUST00000183692 110 ntBASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Gm18027-201ENSMUST00000218947 619 ntBASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx6-1Q99MA9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm22331-201ENSMUST00000158066 136 ntBASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx6-1Q99MA9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx6-1Q99MA9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms