Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.42■□□□□ 0.22
Hps4Q99KG7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Gm29741-201ENSMUST00000192667 421 ntBASIC16.42■□□□□ 0.22
Hps4Q99KG7 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.42■□□□□ 0.22
Hps4Q99KG7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.42■□□□□ 0.22
Hps4Q99KG7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hps4Q99KG7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm13689-201ENSMUST00000119360 685 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm11425-201ENSMUST00000119608 498 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm27839-201ENSMUST00000184242 106 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm8463-201ENSMUST00000208573 613 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm17794-201ENSMUST00000220252 955 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm9396-201ENSMUST00000076703 567 ntBASIC16.41■□□□□ 0.22
Hps4Q99KG7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hps4Q99KG7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.4■□□□□ 0.22
Hps4Q99KG7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Gm12485-201ENSMUST00000119641 291 ntBASIC16.4■□□□□ 0.22
Hps4Q99KG7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.4■□□□□ 0.22
Hps4Q99KG7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.4■□□□□ 0.22
Hps4Q99KG7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.4■□□□□ 0.22
Hps4Q99KG7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hps4Q99KG7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hps4Q99KG7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps4Q99KG7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hps4Q99KG7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps4Q99KG7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps4Q99KG7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hps4Q99KG7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hps4Q99KG7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hps4Q99KG7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms