Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb3Q91XZ7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhb3Q91XZ7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Gm27702-201ENSMUST00000184512 56 ntBASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhb3Q91XZ7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhb3Q91XZ7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Gm10175-201ENSMUST00000086013 645 ntBASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb3Q91XZ7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms