Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Gm38058-201ENSMUST00000194323 4368 ntBASIC16■□□□□ 0.15
Trex1Q91XB0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trex1Q91XB0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16■□□□□ 0.15
Trex1Q91XB0 Gm11814-201ENSMUST00000119515 929 ntBASIC16■□□□□ 0.15
Trex1Q91XB0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16■□□□□ 0.15
Trex1Q91XB0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16■□□□□ 0.15
Trex1Q91XB0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trex1Q91XB0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trex1Q91XB0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.99■□□□□ 0.15
Trex1Q91XB0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Gm7561-201ENSMUST00000211203 886 ntBASIC15.99■□□□□ 0.15
Trex1Q91XB0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trex1Q91XB0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trex1Q91XB0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.97■□□□□ 0.15
Trex1Q91XB0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Mir1938-201ENSMUST00000158746 100 ntBASIC15.97■□□□□ 0.15
Trex1Q91XB0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.97■□□□□ 0.15
Trex1Q91XB0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trex1Q91XB0 Gm6091-201ENSMUST00000098307 165 ntBASIC15.97■□□□□ 0.15
Trex1Q91XB0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms