Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Gm27306-201ENSMUST00000183970 107 ntBASIC13.88□□□□□ -0.19
Usb1Q91W78 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.88□□□□□ -0.19
Usb1Q91W78 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.88□□□□□ -0.19
Usb1Q91W78 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.88□□□□□ -0.19
Usb1Q91W78 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Usb1Q91W78 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usb1Q91W78 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Usb1Q91W78 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Usb1Q91W78 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Usb1Q91W78 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Gm5566-201ENSMUST00000116118 459 ntBASIC13.87□□□□□ -0.19
Usb1Q91W78 Gm17837-201ENSMUST00000186435 985 ntBASIC13.87□□□□□ -0.19
Usb1Q91W78 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.87□□□□□ -0.19
Usb1Q91W78 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.87□□□□□ -0.19
Usb1Q91W78 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Usb1Q91W78 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usb1Q91W78 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Usb1Q91W78 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.86□□□□□ -0.19
Usb1Q91W78 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.86□□□□□ -0.19
Usb1Q91W78 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.86□□□□□ -0.19
Usb1Q91W78 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Usb1Q91W78 Gm13823-201ENSMUST00000119930 345 ntBASIC13.86□□□□□ -0.19
Usb1Q91W78 Gm14767-201ENSMUST00000121559 586 ntBASIC13.86□□□□□ -0.19
Usb1Q91W78 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Gm9719-201ENSMUST00000162765 543 ntBASIC13.86□□□□□ -0.19
Usb1Q91W78 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usb1Q91W78 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms