Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Gm6007-201ENSMUST00000208170 823 ntBASIC14.49□□□□□ -0.09
Ddx1Q91VR5 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ddx1Q91VR5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gm23984-201ENSMUST00000157139 203 ntBASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gm8602-201ENSMUST00000184045 607 ntBASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Mir7085-201ENSMUST00000184353 66 ntBASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gm7775-201ENSMUST00000218871 853 ntBASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gm16476-201ENSMUST00000221544 139 ntBASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Dupd1-202ENSMUST00000224735 548 ntBASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ddx1Q91VR5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Gm15321-201ENSMUST00000121290 288 ntBASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Gm6180-201ENSMUST00000065243 498 ntBASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ddx1Q91VR5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms