Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ddx41Q91VN6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Gm3436-201ENSMUST00000179930 840 ntBASIC16.1■□□□□ 0.17
Ddx41Q91VN6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ddx41Q91VN6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Gm11424-201ENSMUST00000121929 829 ntBASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ddx41Q91VN6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx41Q91VN6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx41Q91VN6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx41Q91VN6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ddx41Q91VN6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ddx41Q91VN6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms