Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.9□□□□□ -0.02
TraipQ8VIG6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.9□□□□□ -0.02
TraipQ8VIG6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.9□□□□□ -0.02
TraipQ8VIG6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TraipQ8VIG6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.89□□□□□ -0.03
TraipQ8VIG6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.89□□□□□ -0.03
TraipQ8VIG6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.89□□□□□ -0.03
TraipQ8VIG6 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Gm2495-201ENSMUST00000191160 466 ntBASIC14.89□□□□□ -0.03
TraipQ8VIG6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Gm5035-201ENSMUST00000215581 927 ntBASIC14.89□□□□□ -0.03
TraipQ8VIG6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.89□□□□□ -0.03
TraipQ8VIG6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
TraipQ8VIG6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.88□□□□□ -0.03
TraipQ8VIG6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Gm25116-201ENSMUST00000157191 122 ntBASIC14.88□□□□□ -0.03
TraipQ8VIG6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Gm17150-201ENSMUST00000165577 381 ntBASIC14.88□□□□□ -0.03
TraipQ8VIG6 Gm8584-201ENSMUST00000171982 758 ntBASIC14.88□□□□□ -0.03
TraipQ8VIG6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Gm8463-201ENSMUST00000208573 613 ntBASIC14.88□□□□□ -0.03
TraipQ8VIG6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.88□□□□□ -0.03
TraipQ8VIG6 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.88□□□□□ -0.03
TraipQ8VIG6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Gm24447-201ENSMUST00000083977 338 ntBASIC14.88□□□□□ -0.03
TraipQ8VIG6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TraipQ8VIG6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.87□□□□□ -0.03
TraipQ8VIG6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.87□□□□□ -0.03
TraipQ8VIG6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.87□□□□□ -0.03
TraipQ8VIG6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Mir1894-201ENSMUST00000122802 81 ntBASIC14.87□□□□□ -0.03
TraipQ8VIG6 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Gm27892-201ENSMUST00000185017 106 ntBASIC14.87□□□□□ -0.03
TraipQ8VIG6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TraipQ8VIG6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms