Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps4aQ8VEJ9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Gm45098-201ENSMUST00000207179 657 ntBASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps4aQ8VEJ9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Vps4aQ8VEJ9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Gm25287-201ENSMUST00000103846 110 ntBASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Gm22918-201ENSMUST00000103855 110 ntBASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Mir8102-201ENSMUST00000184148 139 ntBASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Gm5779-201ENSMUST00000218467 910 ntBASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Rubie-203ENSMUST00000227803 2430 ntBASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps4aQ8VEJ9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms