Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rpa1Q8VEE4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Rpa1Q8VEE4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Gm28659-201ENSMUST00000188013 759 ntBASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Gm6376-201ENSMUST00000209407 580 ntBASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Gm2594-201ENSMUST00000214774 742 ntBASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rpa1Q8VEE4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Mir8098-201ENSMUST00000184011 137 ntBASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rpa1Q8VEE4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rpa1Q8VEE4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms