Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nudcd3Q8R1N4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Thap2-203ENSMUST00000218989 527 ntBASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Nudcd3Q8R1N4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Gm27301-201ENSMUST00000184012 127 ntBASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd3Q8R1N4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Gm38094-201ENSMUST00000195864 2978 ntBASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Gm9103-201ENSMUST00000119371 405 ntBASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Gm45003-201ENSMUST00000205875 2158 ntBASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nudcd3Q8R1N4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd3Q8R1N4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms