Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clrn1Q8K445 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Clrn1Q8K445 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.25□□□□□ -0.29
Clrn1Q8K445 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.25□□□□□ -0.29
Clrn1Q8K445 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.25□□□□□ -0.29
Clrn1Q8K445 Gm44608-201ENSMUST00000206827 855 ntBASIC13.25□□□□□ -0.29
Clrn1Q8K445 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Clrn1Q8K445 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.25□□□□□ -0.29
Clrn1Q8K445 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clrn1Q8K445 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Gm25144-201ENSMUST00000179561 110 ntBASIC13.24□□□□□ -0.29
Clrn1Q8K445 Gm25352-201ENSMUST00000179815 110 ntBASIC13.24□□□□□ -0.29
Clrn1Q8K445 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.24□□□□□ -0.29
Clrn1Q8K445 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clrn1Q8K445 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gm27618-201ENSMUST00000183671 60 ntBASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gm27533-201ENSMUST00000183800 152 ntBASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Gm38294-201ENSMUST00000192831 381 ntBASIC13.23□□□□□ -0.29
Clrn1Q8K445 Shd-206ENSMUST00000225145 998 ntBASIC13.23□□□□□ -0.29
Clrn1Q8K445 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.23□□□□□ -0.29
Clrn1Q8K445 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clrn1Q8K445 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms