Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtn1Q8K0T0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Gm21470-201ENSMUST00000187680 696 ntBASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rtn1Q8K0T0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Gm4875-201ENSMUST00000118257 786 ntBASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Gm15393-201ENSMUST00000120499 219 ntBASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Gm12151-201ENSMUST00000121374 290 ntBASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rtn1Q8K0T0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Gm6754-201ENSMUST00000117124 913 ntBASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Gm27989-201ENSMUST00000184721 107 ntBASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rtn1Q8K0T0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms