Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Gm43094-201ENSMUST00000196549 921 ntBASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rftn2Q8CHX7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Gm12138-201ENSMUST00000122180 951 ntBASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Gm26464-201ENSMUST00000157094 305 ntBASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rftn2Q8CHX7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rftn2Q8CHX7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rftn2Q8CHX7 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rftn2Q8CHX7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rftn2Q8CHX7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rftn2Q8CHX7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rftn2Q8CHX7 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rftn2Q8CHX7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Gm28911-201ENSMUST00000188837 117 ntBASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rftn2Q8CHX7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rftn2Q8CHX7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms