Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Brf1Q8CFK2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Brf1Q8CFK2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Brf1Q8CFK2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Brf1Q8CFK2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf1Q8CFK2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf1Q8CFK2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf1Q8CFK2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Gm4875-201ENSMUST00000118257 786 ntBASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Gm27989-201ENSMUST00000184721 107 ntBASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Gm21470-201ENSMUST00000187680 696 ntBASIC16.91■□□□□ 0.3
Brf1Q8CFK2 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf1Q8CFK2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf1Q8CFK2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Brf1Q8CFK2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Brf1Q8CFK2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Brf1Q8CFK2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Brf1Q8CFK2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Brf1Q8CFK2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Gm15393-201ENSMUST00000120499 219 ntBASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Brf1Q8CFK2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms