Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Gm10275-202ENSMUST00000168697 495 ntBASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Gm34391-201ENSMUST00000203706 907 ntBASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Gm10275-201ENSMUST00000092620 635 ntBASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc28bQ8CEG5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.86□□□□□ -0.19
Ccdc28bQ8CEG5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Gm7153-201ENSMUST00000117092 455 ntBASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Gm10154-201ENSMUST00000084445 354 ntBASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc28bQ8CEG5 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms