Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Gm5866-201ENSMUST00000177881 973 ntBASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nup88Q8CEC0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nup88Q8CEC0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Gm14767-201ENSMUST00000121559 586 ntBASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Gm27680-201ENSMUST00000184192 160 ntBASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.55■□□□□ 0.24
Nup88Q8CEC0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.54■□□□□ 0.24
Nup88Q8CEC0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Gm9063-201ENSMUST00000223299 582 ntBASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nup88Q8CEC0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms