Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Gm5687-201ENSMUST00000118252 640 ntBASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim52Q8CDV4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.2■□□□□ 0.34
Trim52Q8CDV4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Gm11803-201ENSMUST00000119966 444 ntBASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Gm6152-201ENSMUST00000151704 340 ntBASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim52Q8CDV4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Proscos-202ENSMUST00000178990 666 ntBASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Gm29649-201ENSMUST00000185649 419 ntBASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim52Q8CDV4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm15770-201ENSMUST00000117498 584 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm12957-201ENSMUST00000117835 377 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm12403-201ENSMUST00000121384 959 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Snora78-201ENSMUST00000158630 128 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Gm29608-201ENSMUST00000190444 463 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim52Q8CDV4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim52Q8CDV4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim52Q8CDV4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms