Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcpip1Q8CDG3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vcpip1Q8CDG3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcpip1Q8CDG3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vcpip1Q8CDG3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.05■□□□□ -0
Vcpip1Q8CDG3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms