Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lysmd4Q8CC84 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Gm15590-201ENSMUST00000078419 552 ntBASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lysmd4Q8CC84 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lysmd4Q8CC84 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lysmd4Q8CC84 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms