Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc60Q8C4J0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Mir7684-201ENSMUST00000183858 60 ntBASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc60Q8C4J0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.87■□□□□ 0.45
Ccdc60Q8C4J0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Gm12585-201ENSMUST00000117307 290 ntBASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc60Q8C4J0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Mir497b-201ENSMUST00000093601 125 ntBASIC17.85■□□□□ 0.45
Ccdc60Q8C4J0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms