Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.16□□□□□ -0.3
Vps9d1Q8C190 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps9d1Q8C190 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vps9d1Q8C190 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gm9385-201ENSMUST00000117563 472 ntBASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gm45747-201ENSMUST00000212203 999 ntBASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vps9d1Q8C190 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Gm15483-201ENSMUST00000120338 456 ntBASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Gm26308-201ENSMUST00000157768 69 ntBASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps9d1Q8C190 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms